BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74788at6073Complete633.3388.0aflo_s0102.g27.t1RAB6A-GEF complex partner protein 2JBrowse
74790at6073Complete201.8133.0aflo_s0008.g113.t160S ribosomal protein L28-likeJBrowse
74793at6073Complete599.9350.0aflo_s0076.g26.t1HIV Tat-specific factor 1JBrowse
74796at6073Duplicated465.8294.0aflo_s0216.g19.t1diphthine methyltransferase-like isoform X1JBrowse
74796at6073Duplicated444.7294.0aflo_s0216.g19.t3diphthine methyltransferase-like isoform X1JBrowse
74796at6073Duplicated441.3294.0aflo_s0216.g19.t2diphthine methyltransferase-like isoform X1JBrowse
74797at6073Duplicated3694.12008.0aflo_s0034.g6.t1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74797at6073Duplicated3687.92008.0aflo_s0034.g6.t2E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Complete698.1367.0aflo_s0003.g227.t13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete447.4255.0aflo_s0235.g46.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Fragmented1281.4754.0aflo_s0281.g18.t2focal adhesion kinase 1-likeJBrowse
74803at6073Complete678.7391.0aflo_s0517.g6.t1calcium uptake protein 2, mitochondrial-likeJBrowse
74829at6073Complete858.5422.0aflo_s0142.g113.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete737.9443.0aflo_s0318.g15.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Duplicated1078.8598.0aflo_s0052.g66.t1USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1035.6557.0aflo_s0052.g66.t2USP6 N-terminal-like proteinJBrowse
74842at6073Complete613.3343.0aflo_s0160.g20.t2WD repeat-containing 18JBrowse
74851at6073Complete786.5422.0aflo_s0136.g77.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete229.4133.0aflo_s0292.g24.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Complete537.3477.0aflo_s0148.g48.t1probable ATP-dependent RNA helicase ddx31JBrowse
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