BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74772at6073Complete448.1315.0aint_s0003.g156.t1Regulator of microtubule dynamicsJBrowse
74774at6073Fragmented94.662.0aint_s0021.g72.t1AcylphosphataseJBrowse
74778at6073Complete508.3287.0aint_s0209.g27.t1F-box only protein 8JBrowse
74780at6073Complete967.8585.0aint_s0355.g3.t1Leucine-rich repeat-containing protein 40JBrowse
74786at6073Complete428.6211.0aint_s0693.g11.t1type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphataseJBrowse
74787at6073Complete182.5105.0aint_s0225.g37.t1DNA polymerase epsilon subunit 4JBrowse
74788at6073Complete635.9388.0aint_s0211.g31.t1RAB6A-GEF complex partner protein 2JBrowse
74790at6073Complete201.8133.0aint_s0310.g22.t160S ribosomal protein L28-likeJBrowse
74793at6073Complete723.7350.0aint_s0001.g74.t2HIV Tat-specific factor 1JBrowse
74797at6073Duplicated3722.32076.0aint_s0111.g77.t2E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74797at6073Duplicated3716.52076.0aint_s0111.g77.t1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Complete698.1367.0aint_s0566.g12.t13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete447.4255.0aint_s0015.g71.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Duplicated1870.81019.0aint_s0403.g8.t2focal adhesion kinase 1-likeJBrowse
74802at6073Duplicated1843.91019.0aint_s0403.g8.t1focal adhesion kinase 1-likeJBrowse
74803at6073Complete682.2391.0aint_s0466.g8.t1calcium uptake protein 2, mitochondrial-likeJBrowse
74829at6073Fragmented568.8287.0aint_s0076.g53.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete590.0393.0aint_s0214.g24.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Duplicated1081.0598.0aint_s0228.g13.t1USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1037.6557.0aint_s0228.g13.t2USP6 N-terminal-like proteinJBrowse
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