BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74876at6073Duplicated675.2485.0alor_g18636.t1WD40 repeatJBrowse
74876at6073Duplicated675.2485.0alor_g18825.t1WD40 repeatJBrowse
74876at6073Duplicated672.9485.0alor_g24238.t1WD40 repeatJBrowse
74879at6073Complete381.2215.0alor_g22251.t1very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2JBrowse
74884at6073Complete293.1172.0alor_g12315.t2Tetratricopeptide repeat protein 36JBrowse
74887at6073Complete1286.1832.0alor_g10180.t1GATOR complex protein WDR59-likeJBrowse
74890at6073Complete390.2238.0alor_g21775.t1SIN3-HDAC complex-associated factor-likeJBrowse
74896at6073Complete828.7506.0alor_g23968.t1Sestrin-1JBrowse
74898at6073Complete1470.4850.0alor_g24745.t1Small G protein signaling modulator 2JBrowse
74912at6073Complete1697.2912.0alor_g12452.t1TBC1 domain family member 31JBrowse
74920at6073Complete169.684.0alor_g23366.t1N-alpha-acetyltransferase 38, NatC auxiliary subunit-likeJBrowse
74923at6073Complete572.3336.0alor_g5806.t1Prostaglandin E synthase 2JBrowse
74926at6073Complete282.9175.0alor_g14464.t139S ribosomal protein L10, mitochondrialJBrowse
74928at6073Complete274.4209.0alor_g10279.t1Large ribosomal subunit protein bL9JBrowse
74934at6073Complete885.7576.0alor_g22276.t1NEDD4-binding protein 1-likeJBrowse
74941at6073Complete464.7279.0alor_g9493.t1transcription elongation factor A protein 1JBrowse
74943at6073Complete450.6243.0alor_g19234.t1cilia- and flagella-associated protein 77JBrowse
74946at6073Complete421.6255.0alor_g14457.t1SOSS complex subunit B1JBrowse
74949at6073Complete420.3242.0alor_g11321.t1transmembrane protein 41AJBrowse
74952at6073Complete357.5197.0alor_g5632.t1zinc finger, matrin-type 2JBrowse
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