BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76042at6073Duplicated665.9474.0HOLI04459.G29750potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete647.4532.0HOLI01413.G6171frizzled-4JBrowse
76049at6073Fragmented331.3253.0HOLI00816.G4157integral membrane protein GPR137B-likeJBrowse
76056at6073Complete280.5215.0HOLI00204.G7541high mobility group protein B3-likeJBrowse
76078at6073Complete233.3191.0HOLI00836.G33824transmembrane protein 199JBrowse
76083at6073Duplicated197.6234.0HOLI01550.G27638endonuclease V-likeJBrowse
76083at6073Duplicated202.8220.0HOLI00016.G8535endonuclease V-likeJBrowse
76086at6073Complete394.6389.0HOLI01181.G36197cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76087at6073Complete298.1247.0HOLI00747.G30382transformer-2 protein homolog beta-likeJBrowse
76096at6073Fragmented287.4236.0HOLI01200.G12774zinc transporter ZIP1JBrowse
76101at6073Complete251.7183.0HOLI01516.G13568Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Complete403.1274.0HOLI01604.G60269dnaJ homolog subfamily C member 17JBrowse
76107at6073Complete316.0253.0HOLI00228.G57035coiled-coil domain-containing protein 189JBrowse
76113at6073Complete1578.21146.0HOLI00170.G59179protein timeless homologJBrowse
76132at6073Duplicated400.4363.0HOLI00481.G35695transcription factor Sp5-likeJBrowse
76132at6073Duplicated400.4363.0HOLI02777.G47874transcription factor Sp5-likeJBrowse
76135at6073Complete551.8426.0HOLI00408.G54735Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Complete537.2350.0HOLI00344.G6810ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete337.5308.0HOLI00165.G22153O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Complete1131.8845.0HOLI00431.G41499integrator complex subunit 6JBrowse
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