BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76411at6073Complete444.3561BRAKERIOWP00000015041.1protein spire homolog 1JBrowse
76416at6073Complete478.2318BRAKERIOWP00000009067.1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Complete712.9692BRAKERIOWP00000007829.1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete510.3415BRAKERIOWP00000005384.1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Fragmented576.3475BRAKERIOWP00000020656.1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Complete535.0469BRAKERIOWP00000015480.1tetratricopeptide repeat protein 29-likeJBrowse
76443at6073Complete195.6200BRAKERIOWP00000011300.1tumor protein p53-inducible nuclear protein 2JBrowse
76456at6073Complete830.2665BRAKERIOWP00000005145.1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete980.5854BRAKERIOWP00000019031.1protein CIP2A homologJBrowse
76460at6073Complete500.9394BRAKERIOWP00000019399.1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete690.7522BRAKERIOWP00000018697.1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete328.5281BRAKERIOWP00000006636.1syntaxin-18JBrowse
76465at6073Complete744.1602BRAKERIOWP00000003311.1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Complete1259.3919BRAKERIOWP00000017262.1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete509.4462BRAKERIOWP00000011922.1UBX domain-containing protein 7JBrowse
76480at6073Complete480.3340BRAKERIOWP00000005512.1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1112.9962BRAKERIOWP00000004518.1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete372.3359BRAKERIOWP00000010745.1protein Njmu-R1-likeJBrowse
76492at6073Complete544.7442BRAKERIOWP00000004813.1UBX domain-containing protein 6-likeJBrowse
76494at6073Complete424.6364BRAKERIOWP00000001311.1F-box only protein 4-likeJBrowse
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