BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74842at6073Complete664.6419.0aint_s0010.g122.t1WD repeat-containing 18JBrowse
74846at6073Complete874.4458.0aint_s0046.g57.t1transmembrane protein 181-likeJBrowse
74851at6073Complete786.2422.0aint_s0225.g23.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete230.3133.0aint_s0332.g15.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Complete920.7549.0aint_s0069.g104.t1probable ATP-dependent RNA helicase ddx31JBrowse
74858at6073Complete1518.9946.0aint_s0135.g47.t1MORC family CW-type zinc finger protein 2A-likeJBrowse
74860at6073Fragmented613.8315.0aint_s0270.g30.t1TOM1-like protein 2JBrowse
74866at6073Complete522.7320.0aint_s0113.g68.t15'-AMP-activated protein kinase subunit gamma-1-likeJBrowse
74868at6073Complete720.0379.0aint_s0304.g7.t1oxysterol-binding protein 1JBrowse
74869at6073Complete447.4261.0aint_s0044.g72.t1methyl-CpG-binding domain protein 2JBrowse
74873at6073Fragmented165.6105.0aint_s0056.g29.t1transmembrane protein 208JBrowse
74874at6073Complete1563.1877.0aint_s0186.g5.t1coiled-coil domain-containing protein 40JBrowse
74876at6073Complete531.8420.0aint_s0043.g66.t1WD40 repeatJBrowse
74881at6073Complete1398.9875.0aint_s0446.g6.t1uncharacterized protein LOC116295118 isoform X1JBrowse
74884at6073Complete295.8177.0aint_s0009.g77.t1Tetratricopeptide repeat protein 36JBrowse
74887at6073Complete1645.5924.0aint_s0143.g6.t1GATOR complex protein WDR59-likeJBrowse
74890at6073Complete390.2238.0aint_s0184.g64.t1SIN3-HDAC complex-associated factor-likeJBrowse
74896at6073Complete889.0506.0aint_s0046.g31.t1Sestrin-1JBrowse
74898at6073Duplicated1379.2825.0aint_s0010.g49.t2Small G protein signaling modulator 2JBrowse
74898at6073Duplicated1379.0825.0aint_s0010.g49.t1Small G protein signaling modulator 2JBrowse
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