BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76499at6073Complete288.6222BRAKERIOWP00000014889.1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76502at6073Complete817.5618BRAKERIOWP00000001187.1uncharacterized protein LOC116292841JBrowse
76504at6073Complete702.0790BRAKERIOWP00000013109.1protein inturned-likeJBrowse
76516at6073Complete430.6528BRAKERIOWP00000007811.1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete621.4624BRAKERIOWP00000021074.1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Complete364.8392BRAKERIOWP00000004648.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Complete771.3626BRAKERIOWP00000007966.1neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Fragmented279.6233BRAKERIOWP00000018757.1Charged multivesicular body protein 7JBrowse
76536at6073Complete670.4783BRAKERIOWP00000012202.1transcription initiation factor TFIID subunit 4JBrowse
76543at6073Complete452.9331BRAKERIOWP00000007216.1forkhead box protein N4-likeJBrowse
76545at6073Fragmented151.5102BRAKERIOWP00000014838.1plasminogen receptor (KT)JBrowse
76547at6073Complete505.9436BRAKERIOWP00000008222.1tubulin-specific chaperone E-likeJBrowse
76564at6073Complete235.7194BRAKERIOWP00000013739.1Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Complete208.9148BRAKERIOWP00000002662.139S ribosomal protein L21, mitochondrial-likeJBrowse
76581at6073Complete261.8215BRAKERIOWP00000013199.1RWD domain-containing protein 1JBrowse
76593at6073Complete815.1772BRAKERIOWP00000008816.1IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76595at6073Complete333.3285BRAKERIOWP00000011305.1sorting nexin-20JBrowse
76603at6073Complete640.5596BRAKERIOWP00000001678.1poly(A)-specific ribonuclease PARNJBrowse
76612at6073Fragmented469.9351BRAKERIOWP00000016127.1apoptosis-stimulating of p53 protein 2JBrowse
76613at6073Complete136.6157BRAKERIOWP00000016402.1NADH dehydrogenaseJBrowse
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