BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74788at6073Complete635.0388.0acyt_s0154.g30.t1RAB6A-GEF complex partner protein 2JBrowse
74790at6073Complete205.6133.0acyt_s0019.g87.t160S ribosomal protein L28-likeJBrowse
74793at6073Fragmented424.3222.0acyt_s0022.g143.t1HIV Tat-specific factor 1JBrowse
74796at6073Fragmented284.1185.0acyt_s0214.g30.t1diphthine methyltransferase-like isoform X1JBrowse
74797at6073Duplicated3880.82150.0acyt_s0362.g10.t1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74797at6073Duplicated3875.12150.0acyt_s0362.g10.t2E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Complete698.8367.0acyt_s0021.g185.t13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete449.6254.0acyt_s0077.g43.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Duplicated1834.11019.0acyt_s0051.g113.t1focal adhesion kinase 1-likeJBrowse
74802at6073Duplicated1804.81019.0acyt_s0051.g113.t2focal adhesion kinase 1-likeJBrowse
74803at6073Complete683.6391.0acyt_s0211.g31.t1calcium uptake protein 2, mitochondrial-likeJBrowse
74829at6073Complete859.4422.0acyt_s0063.g27.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete632.7389.0acyt_s0241.g14.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Duplicated1083.0598.0acyt_s0008.g117.t1USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1039.8557.0acyt_s0008.g117.t2USP6 N-terminal-like proteinJBrowse
74842at6073Complete662.9419.0acyt_s0025.g29.t1WD repeat-containing 18JBrowse
74846at6073Fragmented522.4261.0acyt_s0005.g94.t1transmembrane protein 181-likeJBrowse
74851at6073Complete785.2422.0acyt_s0001.g40.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete228.3133.0acyt_s0191.g22.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Complete788.8469.0acyt_s0014.g195.t1probable ATP-dependent RNA helicase ddx31JBrowse
Go to page: of 172 pages
TOP