BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74796at6073Fragmented283.2185.0aech_s0007.g19.t1diphthine methyltransferase-like isoform X1JBrowse
74797at6073Duplicated3965.12166.0aech_s0005.g103.t1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74797at6073Duplicated3959.82166.0aech_s0005.g103.t2E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Fragmented523.9275.0aech_s0011.g372.t23-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete450.3254.0aech_s0177.g45.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Duplicated1534.4892.0aech_s0046.g134.t2focal adhesion kinase 1-likeJBrowse
74802at6073Duplicated1506.0892.0aech_s0046.g134.t1focal adhesion kinase 1-likeJBrowse
74803at6073Complete683.6391.0aech_s0236.g11.t1calcium uptake protein 2, mitochondrial-likeJBrowse
74838at6073Fragmented462.6280.0aech_s0134.g27.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Duplicated1179.5598.0aech_s0160.g56.t3USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1137.3557.0aech_s0160.g56.t5USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1043.2557.0aech_s0160.g56.t1USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1043.2557.0aech_s0160.g56.t2USP6 N-terminal-like proteinJBrowse
74839at6073Duplicated1043.2557.0aech_s0160.g56.t4USP6 N-terminal-like proteinJBrowse
74842at6073Complete652.9419.0aech_s0111.g20.t1WD repeat-containing 18JBrowse
74846at6073Fragmented467.3239.0aech_s0003.g427.t1transmembrane protein 181-likeJBrowse
74851at6073Complete784.6422.0aech_s0070.g91.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete228.3133.0aech_s0079.g22.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Complete925.6550.0aech_s0021.g122.t1probable ATP-dependent RNA helicase ddx31JBrowse
74858at6073Complete1522.4946.0aech_s0011.g295.t1MORC family CW-type zinc finger protein 2A-likeJBrowse
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