BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74829at6073Complete860.0422.0agem_s0227.g3.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete587.4389.0agem_s0216.g20.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Complete895.7503.0agem_s0410.g6.t1USP6 N-terminal-like proteinJBrowse
74842at6073Complete663.0418.0agem_s0509.g6.t1WD repeat-containing 18JBrowse
74851at6073Complete786.2422.0agem_s0231.g28.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete226.9133.0agem_s0089.g45.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Fragmented740.6428.0agem_s0029.g102.t1probable ATP-dependent RNA helicase ddx31JBrowse
74858at6073Complete1518.6946.0agem_s0002.g177.t1MORC family CW-type zinc finger protein 2A-likeJBrowse
74860at6073Complete727.7417.0agem_s0070.g6.t1TOM1-like protein 2JBrowse
74866at6073Complete592.4360.0agem_s0094.g104.t15'-AMP-activated protein kinase subunit gamma-1-likeJBrowse
74868at6073Duplicated816.0406.0agem_s0201.g21.t2oxysterol-binding protein 1JBrowse
74868at6073Duplicated785.3406.0agem_s0201.g21.t1oxysterol-binding protein 1JBrowse
74869at6073Complete446.4261.0agem_s0012.g22.t1methyl-CpG-binding domain protein 2JBrowse
74873at6073Fragmented165.6105.0agem_s0377.g6.t1transmembrane protein 208JBrowse
74874at6073Complete1796.8972.0agem_s0175.g7.t1coiled-coil domain-containing protein 40JBrowse
74876at6073Fragmented325.2175.0agem_s0039.g121.t1WD40 repeatJBrowse
74881at6073Complete1394.7875.0agem_s0318.g6.t1uncharacterized protein LOC116295118 isoform X1JBrowse
74884at6073Complete300.0177.0agem_s0025.g51.t1Tetratricopeptide repeat protein 36JBrowse
74887at6073Complete1564.3894.0agem_s0013.g175.t1GATOR complex protein WDR59-likeJBrowse
74890at6073Complete389.5238.0agem_s0001.g305.t1SIN3-HDAC complex-associated factor-likeJBrowse
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