BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74912at6073Fragmented976.3498.0aint_s0161.g9.t1TBC1 domain family member 31JBrowse
74920at6073Complete169.384.0aint_s0001.g166.t1N-alpha-acetyltransferase 38, NatC auxiliary subunit-likeJBrowse
74923at6073Duplicated576.9334.0aint_s0156.g10.t1Prostaglandin E synthase 2JBrowse
74923at6073Duplicated576.9334.0aint_s0156.g10.t2Prostaglandin E synthase 2JBrowse
74926at6073Complete287.6175.0aint_s0032.g59.t139S ribosomal protein L10, mitochondrialJBrowse
74928at6073Duplicated255.3188.0aint_s0188.g18.t1Large ribosomal subunit protein bL9JBrowse
74928at6073Duplicated252.6188.0aint_s2934.g1.t1Large ribosomal subunit protein bL9JBrowse
74934at6073Complete891.8576.0aint_s0327.g6.t1NEDD4-binding protein 1-likeJBrowse
74941at6073Complete466.9279.0aint_s0175.g8.t1transcription elongation factor A protein 1JBrowse
74943at6073Complete450.6243.0aint_s0516.g14.t1cilia- and flagella-associated protein 77JBrowse
74946at6073Complete408.6250.0aint_s2650.g1.t1SOSS complex subunit B1JBrowse
74949at6073Complete422.6242.0aint_s0061.g28.t1transmembrane protein 41AJBrowse
74952at6073Complete356.0197.0aint_s0123.g41.t1zinc finger, matrin-type 2JBrowse
74954at6073Complete1742.01095.0aint_s0053.g6.t1N-acetylglucosamine-1-phosphotransferase subunits alpha/betaJBrowse
74972at6073Complete812.2474.0aint_s0265.g12.t1probable tubulin polyglutamylase ttll-15JBrowse
74975at6073Complete576.4328.0aint_s0025.g85.t1trans-1,2-dihydrobenzene-1,2-diol dehydrogenaseJBrowse
74985at6073Complete1806.01120.0aint_s0308.g11.t1FH1/FH2 domain-containing protein 3JBrowse
74987at6073Fragmented1226.0636.0aint_s2234.g1.t1condensin complex subunit 1JBrowse
74988at6073Complete758.2471.0aint_s0101.g52.t1FascinJBrowse
74995at6073Complete1835.91043.0aint_s0026.g78.t1adenylate cyclase type 9JBrowse
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