BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75119at6073Complete394.5209.0FUN_015140-T1calcium release-activated calcium channel protein 1JBrowse
75126at6073Complete517.3250.0FUN_014491-T1Ribosome maturation protein SBDSJBrowse
75129at6073Complete805.9445.0FUN_033755-T1potassium voltage-gated channel subfamily A member 1JBrowse
75133at6073Complete978.1546.0FUN_041908-T1transcription factor Dp-1JBrowse
75138at6073Duplicated1770.91111.0FUN_032091-T1pleckstrin homology domain-containing family H member 2-likeJBrowse
75138at6073Duplicated1626.31022.0FUN_032091-T2pleckstrin homology domain-containing family H member 2-likeJBrowse
75141at6073Duplicated1034.6584.0FUN_041874-T2double-strand break repair protein MRE11-likeJBrowse
75141at6073Duplicated1034.3584.0FUN_041874-T1double-strand break repair protein MRE11-likeJBrowse
75152at6073Complete1570.3902.0FUN_016148-T1protein HIRA-likeJBrowse
75154at6073Complete854.4498.0FUN_011776-T1Runt-related transcription factor 1JBrowse
75159at6073Complete838.7458.0FUN_032220-T1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Complete1163.3692.0FUN_006619-T197 kDa heat shock protein-likeJBrowse
75163at6073Complete475.6311.0FUN_011999-T1Vacuolar protein sorting-associated protein vta1JBrowse
75165at6073Complete1051.0654.0FUN_018806-T1islet cell autoantigen 1JBrowse
75169at6073Complete386.5258.0FUN_038311-T1protein Tob1JBrowse
75172at6073Complete843.2529.0FUN_009818-T1Dephospho-CoA kinaseJBrowse
75173at6073Complete1760.61067.0FUN_006635-T1protein transport protein Sec24AJBrowse
75174at6073Complete863.5503.0FUN_040040-T1Serine/threonine-protein kinase RIO1JBrowse
75178at6073Complete1302.7740.0FUN_036096-T1ATP-binding cassette sub- B member 9JBrowse
75180at6073Fragmented492.9265.0FUN_024054-T1round spermatid basic protein 1-like proteinJBrowse
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