BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76327at6073Complete422.5285.0pspe_0.1.m1.39528.m1coiled-coil domain-containing protein 166JBrowse
76343at6073Complete616.5391.0pspe_0.1.m1.60765.m1F-box only protein 30JBrowse
76350at6073Complete451.1280.0pspe_0.1.m1.14643.m1STAGA complex 65 subunit gamma-likeJBrowse
76353at6073Fragmented473.9327.0pspe_0.1.m1.56167.m1tRNA pseudouridine synthase Pus10-likeJBrowse
76363at6073Complete360.4236.0pspe_0.1.m1.41291.m1Synaptosomal-associated proteinJBrowse
76365at6073Complete494.8368.0pspe_0.1.m1.66692.m1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76394at6073Complete435.4301.0pspe_0.1.m1.29694.m1pleckstrin homology domain-containing family A member 1-likeJBrowse
76398at6073Complete1222.5743.0pspe_0.1.m1.35390.m1S1 RNA-binding domain-containing protein 1JBrowse
76410at6073Complete250.7168.0pspe_0.1.m1.2371.m1uncharacterized protein C5orf49-likeJBrowse
76411at6073Complete854.1562.0pspe_0.1.m1.30474.m1protein spire homolog 1JBrowse
76416at6073Complete585.2319.0pspe_0.1.m1.67245.m1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Complete998.6679.0pspe_0.1.m1.16411.m1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete584.4399.0pspe_0.1.m1.35497.m1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Fragmented708.6446.0pspe_0.1.m1.27941.m1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Fragmented609.4145.0pspe_0.1.m1.67446.m1tetratricopeptide repeat protein 29-likeJBrowse
76456at6073Fragmented1076.4629.0pspe_0.1.m1.63651.m1twinkle protein, mitochondrial-likeJBrowse
76457at6073Complete1473.4914.0pspe_0.1.m1.7188.m1protein CIP2A homologJBrowse
76460at6073Complete217.5345.0pspe_0.1.m1.24149.m1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete1057.7640.0pspe_0.1.m1.67631.m1short transient receptor potential channel 4-likeJBrowse
76464at6073Fragmented391.0242.0pspe_0.1.m1.45310.m1syntaxin-18JBrowse
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