BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75138at6073Duplicated1507.71027.0NY_Scal100_v1.15325.1pleckstrin homology domain-containing family H member 2-likeJBrowse
75141at6073Complete904.5565.0NY_Scal100_v1.51675.1double-strand break repair protein MRE11-likeJBrowse
75152at6073Complete1473.1902.0NY_Scal100_v1.3285.1protein HIRA-likeJBrowse
75154at6073Complete700.4497.0NY_Scal100_v1.47001.1Runt-related transcription factor 1JBrowse
75159at6073Complete391.9407.0NY_Scal100_v1.3443.1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Complete1296.6815.0NY_Scal100_v1.25475.197 kDa heat shock protein-likeJBrowse
75163at6073Duplicated421.7308.0NY_Scal100_v1.24792.1Vacuolar protein sorting-associated protein vta1JBrowse
75163at6073Duplicated420.7308.0NY_Scal100_v1.3700.1Vacuolar protein sorting-associated protein vta1JBrowse
75165at6073Complete852.8588.0NY_Scal100_v1.21944.1islet cell autoantigen 1JBrowse
75169at6073Complete319.1258.0NY_Scal100_v1.17185.1protein Tob1JBrowse
75172at6073Duplicated736.0529.0NY_Scal100_v1.30464.1Dephospho-CoA kinaseJBrowse
75172at6073Duplicated649.1494.0NY_Scal100_v1.27968.1Dephospho-CoA kinaseJBrowse
75173at6073Duplicated1649.61067.0NY_Scal100_v1.45403.1protein transport protein Sec24AJBrowse
75173at6073Duplicated1647.61067.0NY_Scal100_v1.44325.1protein transport protein Sec24AJBrowse
75174at6073Complete836.9500.0NY_Scal100_v1.54206.1Serine/threonine-protein kinase RIO1JBrowse
75178at6073Complete893.9617.0NY_Scal100_v1.3665.1ATP-binding cassette sub- B member 9JBrowse
75180at6073Fragmented323.7174.0NY_Scal100_v1.1051.1round spermatid basic protein 1-like proteinJBrowse
75184at6073Duplicated1119.1877.0NY_Scal100_v1.25631.1transcription factor SPT20 homologJBrowse
75184at6073Duplicated1077.5842.0NY_Scal100_v1.4097.1transcription factor SPT20 homologJBrowse
75187at6073Duplicated677.9405.0NY_Scal100_v1.8030.1RNA pseudouridylate synthase domain-containing protein 2JBrowse
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