BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5527at6073Fragmented199.7113.0aech_s0307.g1.t1protein SYS1 homologJBrowse
5560at6073Complete622.1361.0aech_s0039.g11.t2snRNA-activating protein complex subunit 3JBrowse
5616at6073Complete363.1190.0aech_s0058.g52.t1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5670at6073Complete408.9230.0aech_s0069.g20.t1MIT domain-containing protein 1JBrowse
5708at6073Complete651.7345.0aech_s0021.g216.t1ATPase family AAA domain-containing 1JBrowse
5718at6073Duplicated1924.2865.0aech_s0056.g104.t2Valine--tRNA ligaseJBrowse
5718at6073Duplicated1782.8865.0aech_s0056.g104.t1Valine--tRNA ligaseJBrowse
5762at6073Fragmented366.6185.0aech_s0131.g60.t1ribonuclease H2 subunit AJBrowse
5972at6073Complete231.2257.0aech_s0054.g64.t1GRB2-associated-binding protein 1-likeJBrowse
5992at6073Complete511.0265.0aech_s0003.g190.t1adenylate kinaseJBrowse
6014at6073Complete707.3374.0aech_s0034.g96.t1uncharacterized protein LOC116304099JBrowse
6088at6073Complete737.3368.0aech_s0204.g5.t1casein kinase IJBrowse
6098at6073Complete301.7209.0aech_s0015.g152.t1homeobox protein Nkx-6.1JBrowse
6124at6073Complete348.5173.0aech_s0017.g109.t1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6132at6073Fragmented195.2123.0aech_s0002.g40.t1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Duplicated1007.1574.0aech_s0142.g62.t3replication protein A 70 kDa DNA-binding subunitJBrowse
6185at6073Duplicated1006.6574.0aech_s0142.g62.t2replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Duplicated1246.8854.0aech_s0009.g90.t1uncharacterized protein LOC114955792 isoform X1JBrowse
6198at6073Duplicated1244.0852.0aech_s0009.g90.t2uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Complete956.0470.0aech_s0088.g75.t1citrate synthase, mitochondrial-likeJBrowse
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