BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5708at6073Complete651.1345.0aint_s0326.g8.t1ATPase family AAA domain-containing 1JBrowse
5718at6073Duplicated2188.6964.0aint_s0247.g27.t2Valine--tRNA ligaseJBrowse
5718at6073Duplicated2023.7964.0aint_s0247.g27.t1Valine--tRNA ligaseJBrowse
5762at6073Complete549.2296.0aint_s0072.g15.t1ribonuclease H2 subunit AJBrowse
5972at6073Complete238.6254.0aint_s0014.g50.t1GRB2-associated-binding protein 1-likeJBrowse
6014at6073Complete708.9374.0aint_s0390.g8.t1uncharacterized protein LOC116304099JBrowse
6088at6073Complete737.7369.0aint_s0467.g5.t1casein kinase IJBrowse
6098at6073Complete301.0208.0aint_s0840.g1.t1homeobox protein Nkx-6.1JBrowse
6132at6073Complete297.5175.0aint_s0070.g2.t1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Complete1012.9574.0aint_s0169.g8.t1replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Duplicated1247.7854.0aint_s0033.g81.t1uncharacterized protein LOC114955792 isoform X1JBrowse
6198at6073Duplicated1244.7852.0aint_s0033.g81.t2uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Complete954.4470.0aint_s0113.g40.t1citrate synthase, mitochondrial-likeJBrowse
6261at6073Fragmented379.6232.0aint_s0172.g34.t2SEC14 cytosolic factor-likeJBrowse
6314at6073Complete896.8591.0aint_s0169.g57.t1SET and MYND domain-containing protein 4JBrowse
6330at6073Complete975.9481.0aint_s0020.g40.t1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete713.7358.0aint_s0079.g34.t1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6375at6073Complete753.1414.0aint_s0087.g17.t1putative cytochrome P450 120JBrowse
6410at6073Complete1376.8741.0aint_s0466.g12.t1ubiquitin-protein ligase E3AJBrowse
6483at6073Complete2164.6965.0aint_s0007.g63.t2UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
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