BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5475at6073Complete319.6185.0amic_s0089.g31.t1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5506at6073Complete267.9168.0amic_s0240.g24.t128S ribosomal protein S24, mitochondrialJBrowse
5527at6073Fragmented197.9113.0amic_s0002.g389.t1protein SYS1 homologJBrowse
5560at6073Fragmented454.4231.0amic_s0096.g10.t1snRNA-activating protein complex subunit 3JBrowse
5616at6073Duplicated363.1190.0amic_s0028.g56.t1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5616at6073Duplicated347.5188.0amic_s0028.g56.t2mitochondrial import inner membrane translocase subunit Tim23JBrowse
5708at6073Complete652.6345.0amic_s0014.g16.t1ATPase family AAA domain-containing 1JBrowse
5718at6073Complete1823.2894.0amic_s0118.g35.t1Valine--tRNA ligaseJBrowse
5762at6073Complete549.2296.0amic_s0246.g32.t1ribonuclease H2 subunit AJBrowse
5972at6073Complete237.5257.0amic_s0091.g32.t1GRB2-associated-binding protein 1-likeJBrowse
5992at6073Duplicated512.1265.0amic_s0153.g3.t1adenylate kinaseJBrowse
5992at6073Duplicated505.2265.0amic_s0153.g3.t2adenylate kinaseJBrowse
6014at6073Complete709.6374.0amic_s0021.g198.t1uncharacterized protein LOC116304099JBrowse
6088at6073Complete737.2368.0amic_s0016.g88.t1casein kinase IJBrowse
6098at6073Complete300.3209.0amic_s0229.g3.t1homeobox protein Nkx-6.1JBrowse
6132at6073Complete294.6173.0amic_s0259.g57.t1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Complete1011.3574.0amic_s0075.g89.t1replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Duplicated1244.3854.0amic_s0015.g98.t2uncharacterized protein LOC114955792 isoform X1JBrowse
6198at6073Duplicated1241.5852.0amic_s0015.g98.t1uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Complete957.2470.0amic_s0099.g96.t1citrate synthase, mitochondrial-likeJBrowse
Go to page: of 171 pages
TOP