BUSCO Gene Details in Acropora millepora

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora milleporaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 97.9% [S: 70.7%, D: 27.3%] F: 0.4%, M: 1.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,137 (97.9%)2,264 (70.7%)873 (27.3%)14 (0.4%)52 (1.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora millepora: 4,695 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4090at6073Duplicated317.6225.0XP_029193365.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193366.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193367.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193369.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193370.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193371.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_029193372.1noggin-likeJBrowse
4090at6073Duplicated317.6225.0XP_044184458.1noggin-likeJBrowse
4117at6073Complete459.8214.0XP_029204302.1ras-related protein Rab-5B-likeJBrowse
4122at6073Duplicated372.6179.0XP_029202080.1Trafficking protein particle complex subunit 3JBrowse
4122at6073Duplicated372.6179.0XP_029202151.1Trafficking protein particle complex subunit 3JBrowse
4122at6073Duplicated372.6179.0XP_044178071.1Trafficking protein particle complex subunit 3JBrowse
4138at6073Duplicated917.2428.0XP_029208413.1isocitrate dehydrogenase JBrowse
4138at6073Duplicated910.6415.0XP_044184192.1isocitrate dehydrogenase JBrowse
4148at6073Complete759.1485.0XP_029191759.2sphingosine kinase 2-likeJBrowse
4192at6073Duplicated929.6594.0XP_029181747.2Prolyl 3-hydroxylase 2JBrowse
4192at6073Duplicated932.3593.0XP_029181740.2Prolyl 3-hydroxylase 2JBrowse
4196at6073Duplicated1204.8693.0XP_044168375.1NHL repeat-containing protein 2JBrowse
4196at6073Duplicated1194.7693.0XP_044168910.1NHL repeat-containing protein 2JBrowse
4204at6073Complete662.6379.0XP_029199228.2ethanolaminephosphotransferase 1JBrowse
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