BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3738at6073Duplicated717.6399.0XP_074631644.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Duplicated193.185.0XP_074621870.1ubiquitin-fold modifier 1JBrowse
3752at6073Duplicated192.085.0XP_074621869.1ubiquitin-fold modifier 1JBrowse
3768at6073Duplicated1284.8640.0XP_074638725.1glycogen JBrowse
3768at6073Duplicated1280.5640.0XP_074638724.1glycogen JBrowse
3797at6073Duplicated546.7315.0XP_074614866.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3797at6073Duplicated493.9315.0XP_074614873.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Duplicated636.8369.0XP_074623057.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3805at6073Duplicated636.8369.0XP_074623058.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3805at6073Duplicated636.8369.0XP_074623059.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3805at6073Duplicated636.8369.0XP_074623060.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete863.9468.0XP_074625491.1F-box/LRR-repeat protein 20JBrowse
3848at6073Complete936.6478.0XP_074608632.15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Duplicated563.9365.0XP_074618388.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3897at6073Duplicated555.8365.0XP_074618387.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3897at6073Duplicated521.9365.0XP_074618391.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3897at6073Duplicated520.8365.0XP_074618389.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3897at6073Duplicated514.4365.0XP_074618390.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Complete1149.1641.0XP_074621248.1Gamma-tubulin complex component 4JBrowse
3924at6073Complete169.776.0XP_074606898.1signal recognition particle 9 kDa proteinJBrowse
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