BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3192at6073Duplicated296.4155.0g9098.t1.1N-alpha-acetyltransferase 50JBrowse
3247at6073Duplicated554.5343.0BRAKERHOCP00005002141.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3247at6073Duplicated554.5343.0g4713.t1.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Duplicated595.2336.0BRAKERHOCP00005014828.1nucleoporin SEH1-likeJBrowse
3252at6073Duplicated595.2336.0g17657.t1.1nucleoporin SEH1-likeJBrowse
3337at6073Duplicated951.4503.0BRAKERHOCP00005012022.1pre-mRNA-processing factor 19JBrowse
3337at6073Duplicated951.4503.0g18578.t1.1pre-mRNA-processing factor 19JBrowse
3346at6073Duplicated549.3301.0BRAKERHOCP00005019512.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated549.3301.0g9403.t1.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Duplicated525.3410.0BRAKERHOCP00005014768.1E3 ubiquitin-protein ligase MYLIPJBrowse
3482at6073Duplicated525.3410.0g17641.t1.1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Duplicated372.5286.0BRAKERHOCP00005013284.1protein FAM166B-likeJBrowse
3490at6073Duplicated372.5286.0g20160.t1.1protein FAM166B-likeJBrowse
3507at6073Duplicated257.5170.0BRAKERHOCP00005006790.1lactoylglutathione lyase-likeJBrowse
3507at6073Duplicated257.5170.0g4499.t1.1lactoylglutathione lyase-likeJBrowse
3517at6073Fragmented243.6252.0BRAKERHOCP00005016040.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Duplicated207.1104.0BRAKERHOCP00005003412.160S ribosomal protein L44JBrowse
3526at6073Duplicated207.1104.0g13722.t1.160S ribosomal protein L44JBrowse
3527at6073Duplicated859.0693.0BRAKERHOCP00005014583.1short transient receptor potential channel 4-associated proteinJBrowse
3527at6073Duplicated859.0693.0g17982.t1.1short transient receptor potential channel 4-associated proteinJBrowse
Go to page: of 262 pages
TOP