BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6358at6073Fragmented412.3216.0pspe_0.1.m1.43944.m1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6371at6073Complete429.6199.0pspe_0.1.m1.35183.m1NADH-ubiquinone oxidoreductase subunit 8JBrowse
6375at6073Complete663.6372.0pspe_0.1.m1.18893.m1putative cytochrome P450 120JBrowse
6403at6073Complete268.6150.0pspe_0.1.m1.29536.m1bis(5'-adenosyl)-triphosphataseJBrowse
6410at6073Complete532.4664.0pspe_0.1.m1.42850.m1ubiquitin-protein ligase E3AJBrowse
6431at6073Complete347.5238.0pspe_0.1.m1.42288.m1probable transcriptional regulatory protein Kole_1935JBrowse
6483at6073Complete2051.8942.0pspe_0.1.m1.62397.m1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Complete631.0388.0pspe_0.1.m1.50343.m1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete1429.9813.0pspe_0.1.m1.26879.m1anion exchange protein 2-likeJBrowse
6528at6073Complete416.8207.0pspe_0.1.m1.29796.m1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6530at6073Complete368.4231.0pspe_0.1.m1.31038.m1sex-determining region Y proteinJBrowse
6591at6073Complete557.3305.0pspe_0.1.m1.41756.m1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Complete1221.4783.0pspe_0.1.m1.47921.m1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Fragmented383.9203.0pspe_0.1.m1.7161.m1probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1535.2730.0pspe_0.1.m1.17941.m1AconitaseJBrowse
6716at6073Complete180.2100.0pspe_0.1.m1.63344.m1Small integral membrane protein 14JBrowse
6727at6073Complete415.1220.0pspe_0.1.m1.6955.m1Radial spoke head 1JBrowse
6767at6073Fragmented139.277.0pspe_0.1.m1.52380.m110 kda heat shock proteinJBrowse
6833at6073Complete242.9153.0pspe_0.1.m1.25619.m1AP-5 complex subunit sigma-1JBrowse
6836at6073Complete871.3471.0pspe_0.1.m1.50366.m1ATP-dependent RNA helicase DDX41JBrowse
Go to page: of 151 pages
TOP