BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74999at6073Complete379.3206.0aint_s0247.g13.t1thioredoxin domain-containing protein 9JBrowse
75001at6073Complete3068.11775.0aint_s0328.g5.t1ankyrin repeat domain-containing protein 17JBrowse
75002at6073Complete1534.7926.0aint_s0020.g94.t1Retinoblastoma-like protein 1JBrowse
75026at6073Complete618.5348.0aint_s0225.g24.t1Cytoplasmic dynein 2 light intermediate chain 1JBrowse
75028at6073Complete282.8175.0aint_s0277.g16.t1lisH domain-containing protein FOPNL-likeJBrowse
75031at6073Complete302.2170.0aint_s0221.g38.t2translocon-associated protein subunit delta-likeJBrowse
75033at6073Complete270.4186.0aint_s0308.g5.t1uncharacterized protein LOC116305419 isoform X1JBrowse
75041at6073Complete579.3320.0aint_s0122.g6.t1UDP-galactose/UDP-glucose transporter 7JBrowse
75050at6073Complete960.0477.0aint_s0033.g16.t1O-phosphoseryl-tRNA(Sec) selenium transferase-likeJBrowse
75053at6073Complete533.9314.0aint_s0287.g15.t13-ketodihydrosphingosine reductaseJBrowse
75054at6073Complete1456.3863.0aint_s0071.g40.t1bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4JBrowse
75076at6073Complete690.5413.0aint_s0069.g58.t1Zinc finger protein ubi-d4JBrowse
75078at6073Complete3337.81797.0aint_s0370.g10.t1proteasome activator complex subunit 4JBrowse
75082at6073Complete285.0185.0aint_s0007.g28.t1leucine-rich repeat-containing 51JBrowse
75085at6073Complete352.9231.0aint_s0221.g37.t1rRNA-processing protein UTP23 homologJBrowse
75086at6073Duplicated1072.4496.0aint_s0049.g4.t3dihydropyrimidinaseJBrowse
75086at6073Duplicated1051.4496.0aint_s0049.g4.t1dihydropyrimidinaseJBrowse
75086at6073Duplicated1048.4496.0aint_s0049.g4.t2dihydropyrimidinaseJBrowse
75089at6073Complete305.3189.0aint_s0130.g23.t1Clathrin light chain AJBrowse
75095at6073Complete464.9290.0aint_s0022.g76.t1telomere length and silencing protein 1 homologJBrowse
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