BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75152at6073Complete1342.4848.0alor_g20376.t1protein HIRA-likeJBrowse
75154at6073Complete857.3498.0alor_g22589.t1Runt-related transcription factor 1JBrowse
75159at6073Complete839.3458.0alor_g7242.t1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Complete1412.1788.0alor_g8355.t197 kDa heat shock protein-likeJBrowse
75163at6073Complete476.7311.0alor_g6668.t1Vacuolar protein sorting-associated protein vta1JBrowse
75165at6073Complete1050.7654.0alor_g6036.t1islet cell autoantigen 1JBrowse
75172at6073Complete843.9529.0alor_g3705.t1Dephospho-CoA kinaseJBrowse
75173at6073Complete1736.41042.0alor_g8372.t1protein transport protein Sec24AJBrowse
75174at6073Duplicated864.8503.0alor_g18642.t1Serine/threonine-protein kinase RIO1JBrowse
75174at6073Duplicated864.8503.0alor_g18820.t1Serine/threonine-protein kinase RIO1JBrowse
75174at6073Duplicated864.0503.0alor_g24233.t1Serine/threonine-protein kinase RIO1JBrowse
75178at6073Complete1159.6625.0alor_g3457.t1ATP-binding cassette sub- B member 9JBrowse
75180at6073Complete720.7368.0alor_g1629.t1round spermatid basic protein 1-like proteinJBrowse
75184at6073Complete1307.4824.0alor_g3946.t1transcription factor SPT20 homologJBrowse
75187at6073Complete728.1407.0alor_g15762.t1RNA pseudouridylate synthase domain-containing protein 2JBrowse
75189at6073Complete600.5343.0alor_g11769.t1tropomodulin-1JBrowse
75193at6073Fragmented1006.1670.0alor_g11108.t1probable RNA-binding protein 19JBrowse
75197at6073Complete311.9189.0alor_g10704.t160S ribosomal protein L6JBrowse
75202at6073Complete1154.5665.0alor_g26768.t1serine/threonine-protein phosphatase 4 regulatory subunit 3-likeJBrowse
75207at6073Fragmented663.4339.0alor_g13697.t1SCY1-like protein 2JBrowse
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