BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76465at6073Fragmented633.5415.0pspe_0.1.m1.45624.m1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Complete1610.8933.0pspe_0.1.m1.65260.m1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete792.9509.0pspe_0.1.m1.37600.m1UBX domain-containing protein 7JBrowse
76480at6073Complete559.0358.0pspe_0.1.m1.9905.m1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1846.61182.0pspe_0.1.m1.63558.m1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete476.8339.0pspe_0.1.m1.48402.m1protein Njmu-R1-likeJBrowse
76492at6073Complete735.8442.0pspe_0.1.m1.7181.m1UBX domain-containing protein 6-likeJBrowse
76494at6073Complete608.4379.0pspe_0.1.m1.29958.m1F-box only protein 4-likeJBrowse
76499at6073Complete350.6223.0pspe_0.1.m1.7131.m1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76502at6073Complete936.7578.0pspe_0.1.m1.26150.m1uncharacterized protein LOC116292841JBrowse
76504at6073Complete1271.2814.0pspe_0.1.m1.17356.m1protein inturned-likeJBrowse
76516at6073Complete777.8535.0pspe_0.1.m1.22928.m1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete1000.1627.0pspe_0.1.m1.37809.m1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Complete664.4430.0pspe_0.1.m1.18178.m1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Fragmented1557.2126.0pspe_0.1.m1.25501.m1neurogenic locus notch homolog protein 1-likeJBrowse
76543at6073Complete535.8332.0pspe_0.1.m1.19978.m1forkhead box protein N4-likeJBrowse
76545at6073Complete248.0137.0pspe_0.1.m1.11851.m1plasminogen receptor (KT)JBrowse
76547at6073Complete627.0474.0pspe_0.1.m1.44035.m1tubulin-specific chaperone E-likeJBrowse
76551at6073Fragmented312.2245.0pspe_0.1.m1.58554.m1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76560at6073Fragmented333.1247.0pspe_0.1.m1.65804.m1methionyl-tRNA formyltransferase, mitochondrialJBrowse
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