BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75098at6073Complete1996.71191.0aint_s0046.g75.t1protein still life, isoforms C/SIF type 2JBrowse
75107at6073Complete1317.3784.0aint_s0066.g32.t1N-terminal kinase-like proteinJBrowse
75108at6073Complete768.4385.0aint_s0001.g50.t1Radial spoke head protein 3JBrowse
75109at6073Complete995.8545.0aint_s0411.g8.t1Myotubularin-related protein 9JBrowse
75115at6073Complete651.6379.0aint_s0076.g29.t139S ribosomal protein L3, mitochondrialJBrowse
75116at6073Complete1469.9855.0aint_s0023.g83.t2lysine-specific demethylase 2B-likeJBrowse
75119at6073Complete393.8209.0aint_s0023.g85.t1calcium release-activated calcium channel protein 1JBrowse
75126at6073Complete516.4250.0aint_s0169.g42.t1Ribosome maturation protein SBDSJBrowse
75129at6073Complete810.2445.0aint_s0015.g98.t1potassium voltage-gated channel subfamily A member 1JBrowse
75133at6073Complete978.1546.0aint_s0077.g24.t1transcription factor Dp-1JBrowse
75141at6073Complete1038.8594.0aint_s0077.g57.t1double-strand break repair protein MRE11-likeJBrowse
75152at6073Fragmented780.1579.0aint_s0437.g16.t1protein HIRA-likeJBrowse
75154at6073Complete858.1498.0aint_s0290.g19.t1Runt-related transcription factor 1JBrowse
75159at6073Complete794.0403.0aint_s0307.g23.t1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Fragmented822.7535.0aint_s0080.g14.t197 kDa heat shock protein-likeJBrowse
75169at6073Complete386.0258.0aint_s0186.g29.t1protein Tob1JBrowse
75172at6073Complete842.4529.0aint_s0713.g5.t1Dephospho-CoA kinaseJBrowse
75173at6073Complete1760.51067.0aint_s0080.g28.t1protein transport protein Sec24AJBrowse
75174at6073Complete860.0503.0aint_s0043.g60.t1Serine/threonine-protein kinase RIO1JBrowse
75178at6073Complete1304.8749.0aint_s0041.g77.t1ATP-binding cassette sub- B member 9JBrowse
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