BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75209at6073Complete731.0412.0alor_g26609.t1uncharacterized protein LOC116292089JBrowse
75212at6073Complete390.8264.0alor_g12500.t1Ankyrin repeat domain-containing protein 54JBrowse
75224at6073Complete749.1452.0alor_g14548.t1ADP-ribosylation factor GTPase-activating protein 2JBrowse
75228at6073Complete484.9279.0alor_g117.t1Solute carrier family 25 member 38JBrowse
75230at6073Complete356.9227.0alor_g13583.t1transmembrane protein 127JBrowse
75243at6073Complete187.7112.0alor_g22714.t1uncharacterized protein LOC116298739JBrowse
75250at6073Complete311.0168.0alor_g10602.t1UDP-N-acetylglucosamine transferase subunitJBrowse
75253at6073Complete589.5356.0alor_g26595.t1probable protein disulfide-isomerase A6JBrowse
75255at6073Complete935.0480.0alor_g17961.t1calnexin-like isoform X1JBrowse
75256at6073Complete667.3411.0alor_g16224.t1transmembrane protein 135-likeJBrowse
75260at6073Complete915.0543.0alor_g7805.t1probable ATP-dependent RNA helicase DDX59JBrowse
75266at6073Complete1027.8503.0alor_g1497.t1recombining binding protein suppressor of hairless-likeJBrowse
75276at6073Complete575.1354.0alor_g16152.t1nudC domain-containing protein 3JBrowse
75283at6073Complete1097.7727.0alor_g23020.t1DNA polymerase, Y-family, little finger domainJBrowse
75284at6073Complete1550.3984.0alor_g9913.t1Kinesin-like protein KIF11JBrowse
75288at6073Complete709.4431.0alor_g17624.t1E3 ubiquitin-protein ligase rnf14JBrowse
75295at6073Fragmented595.3372.0alor_g13638.t1serine/threonine-protein kinase BRSK2JBrowse
75301at6073Complete1053.7595.0alor_g6198.t1ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrialJBrowse
75307at6073Complete434.3244.0alor_g14394.t1ATP synthase mitochondrial F1 complex assembly factor 2JBrowse
75316at6073Complete1250.7722.0alor_g1950.t1probable ATP-dependent RNA helicase DDX27JBrowse
Go to page: of 167 pages
TOP