BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75322at6073Complete223.2153.0alor_g22683.t128S ribosomal protein S28, mitochondrialJBrowse
75324at6073Complete852.2478.0alor_g11328.t1basal body-orientation factor 1JBrowse
75325at6073Complete529.4316.0alor_g20082.t128S ribosomal protein S22, mitochondrial-likeJBrowse
75326at6073Complete821.3439.0alor_g14887.t1ceramide kinaseJBrowse
75329at6073Complete373.4208.0alor_g6797.t1hemK methyltransferase family member 2JBrowse
75336at6073Complete1774.11054.0alor_g26511.t1nucleolar protein 6JBrowse
75346at6073Duplicated726.7438.0alor_g18044.t1probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseJBrowse
75346at6073Duplicated713.9428.0alor_g18044.t2probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseJBrowse
75347at6073Complete2979.91776.0alor_g16239.t1brefeldin A-inhibited guanine nucleotide-exchange protein 3JBrowse
75356at6073Duplicated1224.2695.0alor_g7229.t1X-ray repair cross-complementing protein 5JBrowse
75356at6073Duplicated1216.6692.0alor_g7228.t1X-ray repair cross-complementing protein 5JBrowse
75356at6073Duplicated1216.6692.0alor_g7228.t2X-ray repair cross-complementing protein 5JBrowse
75358at6073Complete956.6584.0alor_g2633.t1Nitric oxide-associated protein 1JBrowse
75361at6073Complete395.2237.0alor_g23077.t1RNA transcription, translation and transport factor proteinJBrowse
75363at6073Complete2792.81518.0alor_g25500.t1E3 ubiquitin-protein ligase TRIP12JBrowse
75369at6073Fragmented393.0230.0alor_g1115.t1mesoderm-specific transcript protein-likeJBrowse
75378at6073Complete423.4297.0alor_g1920.t1transmembrane protein 198JBrowse
75382at6073Complete794.8432.0alor_g4013.t1potassium voltage-gated channel subfamily A member 7JBrowse
75387at6073Complete1053.1650.0alor_g3525.t1SID1 transmembrane family member 1JBrowse
75389at6073Complete152.578.0alor_g12182.t1NADH dehydrogenase JBrowse
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