BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76564at6073Fragmented186.5123.0HOLI12817.G7721Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Complete172.2136.0HOLI00614.G6002239S ribosomal protein L21, mitochondrial-likeJBrowse
76581at6073Complete280.1215.0HOLI01469.G33325RWD domain-containing protein 1JBrowse
76593at6073Complete875.0793.0HOLI01093.G32503IQ motif and SEC7 domain-containing protein 1 isoform X1JBrowse
76603at6073Complete579.6478.0HOLI02664.G29033poly(A)-specific ribonuclease PARNJBrowse
76611at6073Complete218.1154.0HOLI00732.G12457chromobox protein homolog 1JBrowse
76612at6073Complete355.5389.0HOLI03153.G59865apoptosis-stimulating of p53 protein 2JBrowse
76613at6073Complete154.6141.0HOLI00519.G8654NADH dehydrogenase JBrowse
76617at6073Complete419.9344.0HOLI00938.G35534all trans-polyprenyl-diphosphate synthase PDSS2-likeJBrowse
76618at6073Fragmented1047.91002.0HOLI00351.G23751mitogen-activated protein kinase kinase kinase 4-likeJBrowse
76619at6073Duplicated339.3371.0HOLI02931.G14634cerebellar degeneration-related protein 2-likeJBrowse
76619at6073Duplicated335.4371.0HOLI03378.G39977cerebellar degeneration-related protein 2-likeJBrowse
76626at6073Complete370.3314.0HOLI00073.G39114vacuolar protein sorting-associated protein 37AJBrowse
76629at6073Complete468.4289.0HOLI00568.G23789ubiquitin recognition factor in ER-associated degradation protein 1JBrowse
76633at6073Complete1642.41376.0HOLI00241.G23992putative ATP-dependent RNA helicase TDRD12JBrowse
76641at6073Complete747.6610.0HOLI01057.G40280UV radiation resistance-associated protein-likeJBrowse
76646at6073Complete223.8272.0HOLI00040.G48885WD repeat-containing protein 53JBrowse
76648at6073Complete375.3285.0HOLI00924.G47720consortin-likeJBrowse
76651at6073Complete440.7406.0HOLI00325.G11911la-related protein 6JBrowse
76659at6073Complete678.0645.0HOLI01650.G54631DNA mismatch repair Msh2-likeJBrowse
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