BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75283at6073Complete1103.1718.0aint_s0066.g37.t1DNA polymerase, Y-family, little finger domainJBrowse
75284at6073Complete1548.2984.0aint_s0017.g99.t1Kinesin-like protein KIF11JBrowse
75288at6073Complete707.0425.0aint_s0377.g4.t1E3 ubiquitin-protein ligase rnf14JBrowse
75295at6073Complete867.3506.0aint_s0002.g172.t1serine/threonine-protein kinase BRSK2JBrowse
75301at6073Complete1054.7595.0aint_s0015.g51.t1ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrialJBrowse
75316at6073Complete1242.5722.0aint_s0105.g40.t1probable ATP-dependent RNA helicase DDX27JBrowse
75322at6073Complete223.2153.0aint_s0199.g34.t128S ribosomal protein S28, mitochondrialJBrowse
75324at6073Complete851.4478.0aint_s0061.g21.t1basal body-orientation factor 1JBrowse
75325at6073Complete530.8316.0aint_s0205.g39.t128S ribosomal protein S22, mitochondrial-likeJBrowse
75326at6073Complete931.8538.0aint_s0257.g17.t1ceramide kinaseJBrowse
75329at6073Complete373.9208.0aint_s0416.g17.t1hemK methyltransferase family member 2JBrowse
75336at6073Fragmented1290.2773.0aint_s0138.g34.t1nucleolar protein 6JBrowse
75346at6073Complete859.5494.0aint_s0027.g33.t1probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseJBrowse
75347at6073Complete3082.81834.0aint_s0517.g14.t1brefeldin A-inhibited guanine nucleotide-exchange protein 3JBrowse
75356at6073Complete1233.8695.0aint_s0307.g10.t1X-ray repair cross-complementing protein 5JBrowse
75358at6073Complete956.7628.0aint_s0119.g15.t1Nitric oxide-associated protein 1JBrowse
75361at6073Complete396.5237.0aint_s0292.g9.t1RNA transcription, translation and transport factor proteinJBrowse
75369at6073Complete550.1321.0aint_s0244.g21.t1mesoderm-specific transcript protein-likeJBrowse
75378at6073Duplicated440.1296.0aint_s0493.g16.t1transmembrane protein 198JBrowse
75378at6073Duplicated413.7279.0aint_s0493.g16.t2transmembrane protein 198JBrowse
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