BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75382at6073Complete793.9431.0aint_s0002.g35.t1potassium voltage-gated channel subfamily A member 7JBrowse
75387at6073Complete1237.0754.0aint_s0120.g33.t1SID1 transmembrane family member 1JBrowse
75389at6073Complete154.978.0aint_s0491.g5.t1NADH dehydrogenase JBrowse
75392at6073Complete885.6484.0aint_s0044.g73.t1RNA-binding protein MEX3BJBrowse
75394at6073Fragmented282.6165.0aint_s0032.g65.t1cell division control protein 6 homologJBrowse
75398at6073Complete355.8189.0aint_s0035.g42.t1YEATS domain-containing protein 4JBrowse
75402at6073Complete1036.3601.0aint_s0181.g10.t1pre-mRNA-processing factor 39JBrowse
75407at6073Complete954.6527.0aint_s0244.g33.t1SRSF protein kinase 1JBrowse
75410at6073Complete664.5422.0aint_s0303.g17.t1Zinc finger CCHC domain-containing 4JBrowse
75414at6073Complete381.2210.0aint_s0016.g73.t1charged multivesicular body protein 6JBrowse
75418at6073Duplicated925.6635.0aint_s0369.g21.t1inactive rhomboid protein 1JBrowse
75418at6073Duplicated907.1624.0aint_s0369.g21.t2inactive rhomboid protein 1JBrowse
75421at6073Fragmented673.7382.0aint_s0316.g7.t2ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75422at6073Complete557.1314.0aint_s0058.g21.t1transmembrane protein 165JBrowse
75433at6073Duplicated1178.7669.0aint_s0098.g31.t1sn1-specific diacylglycerol lipase alpha-likeJBrowse
75433at6073Duplicated1178.6669.0aint_s0098.g31.t2sn1-specific diacylglycerol lipase alpha-likeJBrowse
75435at6073Complete326.9216.0aint_s0101.g8.t1HAUS augmin-like complex subunit 2JBrowse
75436at6073Complete1143.6660.0aint_s0081.g10.t1solute carrier family 12 member 8JBrowse
75439at6073Complete711.6420.0aint_s0069.g64.t1tRNA (guanine(37)-N1)-methyltransferaseJBrowse
75443at6073Complete399.6254.0aint_s0051.g32.t1RNA-binding protein with multiple splicing-likeJBrowse
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