BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76775at6073Fragmented283.8257.0HOLI04452.G14475Xyloside xylosyltransferase 1JBrowse
76776at6073Fragmented235.6178.0HOLI10322.G11314transcription termination factor 3, mitochondrial-likeJBrowse
76778at6073Complete548.8446.0HOLI01833.G31805malate dehydrogenase 1BJBrowse
76787at6073Complete626.1549.0HOLI00910.G8436Far upstream element-binding protein 3JBrowse
76788at6073Complete433.8311.0HOLI00857.G649hsc70-interacting proteinJBrowse
76791at6073Complete553.6442.0HOLI02753.G57481sedoheptulokinase-likeJBrowse
76792at6073Fragmented346.5209.0HOLI00084.G31781STAM-binding protein-likeJBrowse
76797at6073Complete662.5594.0HOLI01731.G5282nuclear pore complex protein Nup88-likeJBrowse
76805at6073Complete352.1382.0HOLI00198.G9139uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete663.8450.0HOLI02058.G8399pectin acetylesterase 5JBrowse
76835at6073Complete485.7442.0HOLI00022.G58127RNA polymerase II-associated protein 3JBrowse
76840at6073Complete371.0390.0HOLI01656.G16556SHC-transforming protein 1JBrowse
76843at6073Complete309.8262.0HOLI00518.G1714leucine-rich repeat-containing protein 59JBrowse
76853at6073Complete1203.91151.0HOLI00003.G5353RB1-inducible coiled-coil protein 1JBrowse
76861at6073Complete606.4425.0HOLI01009.G54674probable protein phosphatase 2C 21JBrowse
76864at6073Complete219.7206.0HOLI01926.G6703meiotic recombination protein REC114JBrowse
76869at6073Complete334.4356.0HOLI00225.G38518FGFR1 oncogene partnerJBrowse
76873at6073Complete1259.51104.0HOLI01000.G32279Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete590.5479.0HOLI02595.G39562ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Complete470.0322.0HOLI00026.G11628signal peptide peptidase-like 3JBrowse
Go to page: of 152 pages
TOP