BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76894at6073Complete851.4625.0pspe_0.1.m1.34129.m1serine/threonine-protein kinase unc-51JBrowse
76896at6073Fragmented363.0257.0pspe_0.1.m1.54771.m1protein tweety homolog 2-likeJBrowse
76901at6073Complete785.9564.0pspe_0.1.m1.71272.m1uncharacterized protein KIAA2013 homologJBrowse
76905at6073Complete458.3312.0pspe_0.1.m1.29161.m1zinc finger protein GLI2-likeJBrowse
76914at6073Complete435.0342.0pspe_0.1.m1.17125.m1E3 ubiquitin-protein ligase TRAIPJBrowse
76915at6073Complete1200.6798.0pspe_0.1.m1.53911.m1WD repeat-containing protein 47JBrowse
76922at6073Fragmented150.2200.0pspe_0.1.m1.42291.m1UBX domain-containing protein 1JBrowse
76925at6073Complete2400.31494.0pspe_0.1.m1.70470.m1uncharacterized protein LOC116302959JBrowse
76928at6073Complete308.4193.0pspe_0.1.m1.49153.m1E3 ubiquitin-protein ligase march2JBrowse
76929at6073Complete221.2165.0pspe_0.1.m1.31104.m1non-histone chromosomal protein 6JBrowse
76930at6073Complete828.4672.0pspe_0.1.m1.52088.m1DNA replication factor Cdt1JBrowse
76935at6073Complete244.0171.0pspe_0.1.m1.56337.m1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Complete663.6414.0pspe_0.1.m1.47463.m1ELMO domain-containing protein 3JBrowse
76943at6073Complete283.2161.0pspe_0.1.m1.15096.m1Zinc finger MYND domain-containing protein 11JBrowse
76948at6073Complete533.8360.0pspe_0.1.m1.64565.m1coiled-coil domain-containing protein 92JBrowse
76966at6073Complete396.3287.0pspe_0.1.m1.6096.m1E2F-associated phosphoprotein-likeJBrowse
76990at6073Complete781.5568.0pspe_0.1.m1.14211.m1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete698.3439.0pspe_0.1.m1.9558.m1glycerate kinase-likeJBrowse
76993at6073Complete546.7452.0pspe_0.1.m1.11814.m1afadin- and alpha-actinin-binding protein B-likeJBrowse
77002at6073Complete905.4523.0pspe_0.1.m1.6297.m1Deformed epidermal autoregulatory factor 1JBrowse
Go to page: of 151 pages
TOP