BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75525at6073Complete249.3209.0NY_Scal100_v1.6372.1sugar transporter SWEET1-likeJBrowse
75533at6073Fragmented366.2207.0NY_Scal100_v1.41146.1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Complete938.2686.0NY_Scal100_v1.1647.1transcriptional repressor NF-X1-likeJBrowse
75542at6073Duplicated2697.33547.0NY_Scal100_v1.32468.1protocadherin-like proteinJBrowse
75542at6073Duplicated2336.03357.0NY_Scal100_v1.29867.1protocadherin-like proteinJBrowse
75557at6073Complete955.4575.0NY_Scal100_v1.44265.1grainyhead-like protein 1 homologJBrowse
75561at6073Complete371.5210.0NY_Scal100_v1.33460.1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Complete575.7311.0NY_Scal100_v1.34521.1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Complete1261.8698.0NY_Scal100_v1.16070.1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Complete1679.51071.0NY_Scal100_v1.14689.1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Complete401.9253.0NY_Scal100_v1.53201.1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Complete695.7419.0NY_Scal100_v1.32301.1protein CBFA2T3-likeJBrowse
75599at6073Complete698.6516.0NY_Scal100_v1.18141.1rho-related BTB domain-containing protein 1JBrowse
75603at6073Complete534.4296.0NY_Scal100_v1.7442.1LIM domain-binding protein 2JBrowse
75608at6073Duplicated635.6450.0NY_Scal100_v1.24633.1rabenosyn-5JBrowse
75608at6073Duplicated609.4450.0NY_Scal100_v1.49985.1rabenosyn-5JBrowse
75610at6073Complete280.7200.0NY_Scal100_v1.25510.1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Complete1020.6630.0NY_Scal100_v1.52975.1dymeclin-likeJBrowse
75616at6073Complete730.0446.0NY_Scal100_v1.52999.1FAS-associated factor 2JBrowse
75625at6073Complete357.2212.0NY_Scal100_v1.4515.1Methyltransferase-like protein 23JBrowse
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