BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75533at6073Complete477.7288.0alor_g25661.t1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Complete1277.3791.0alor_g11602.t1transcriptional repressor NF-X1-likeJBrowse
75542at6073Complete5237.73618.0alor_g10172.t1protocadherin-like proteinJBrowse
75557at6073Complete1021.7587.0alor_g25307.t1grainyhead-like protein 1 homologJBrowse
75561at6073Complete374.8187.0alor_g18483.t1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Complete616.1317.0alor_g20553.t1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Complete1320.9722.0alor_g20559.t1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Complete1837.21073.0alor_g19787.t1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Complete512.4289.0alor_g10821.t1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Complete756.1441.0alor_g9210.t1protein CBFA2T3-likeJBrowse
75587at6073Complete644.7378.0alor_g26915.t1nuclease EXOG, mitochondrialJBrowse
75598at6073Duplicated800.8472.0alor_g12869.t1transcription factor CP2JBrowse
75598at6073Duplicated729.5432.0alor_g5345.t1transcription factor CP2JBrowse
75599at6073Complete1036.1604.0alor_g21730.t1rho-related BTB domain-containing protein 1JBrowse
75603at6073Duplicated567.2328.0alor_g9949.t3LIM domain-binding protein 2JBrowse
75603at6073Duplicated558.5328.0alor_g9949.t2LIM domain-binding protein 2JBrowse
75603at6073Duplicated533.2300.0alor_g9949.t1LIM domain-binding protein 2JBrowse
75608at6073Complete550.9367.0alor_g1101.t1rabenosyn-5JBrowse
75610at6073Complete314.0199.0alor_g24901.t1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Complete1126.5631.0alor_g11858.t1dymeclin-likeJBrowse
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