BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75389at6073Complete147.973.0amic_s0115.g4.t1NADH dehydrogenase JBrowse
75392at6073Complete884.9484.0amic_s0320.g8.t1RNA-binding protein MEX3BJBrowse
75394at6073Fragmented567.9309.0amic_s0225.g28.t1cell division control protein 6 homologJBrowse
75398at6073Complete457.1219.0amic_s0045.g42.t1YEATS domain-containing protein 4JBrowse
75402at6073Complete1039.2601.0amic_s0088.g13.t2pre-mRNA-processing factor 39JBrowse
75407at6073Complete954.3527.0amic_s0288.g21.t1SRSF protein kinase 1JBrowse
75414at6073Duplicated385.5210.0amic_s0008.g32.t1charged multivesicular body protein 6JBrowse
75414at6073Duplicated385.3210.0amic_s0571.g1.t1charged multivesicular body protein 6JBrowse
75418at6073Duplicated1230.0749.0amic_s0095.g27.t1inactive rhomboid protein 1JBrowse
75418at6073Duplicated1211.6749.0amic_s0095.g27.t2inactive rhomboid protein 1JBrowse
75421at6073Duplicated1187.8698.0amic_s0050.g8.t2ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75421at6073Duplicated1187.6698.0amic_s0050.g8.t1ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75422at6073Complete555.6314.0amic_s0031.g41.t1transmembrane protein 165JBrowse
75433at6073Duplicated919.8552.0amic_s0182.g3.t1sn1-specific diacylglycerol lipase alpha-likeJBrowse
75433at6073Duplicated919.8552.0amic_s0182.g3.t2sn1-specific diacylglycerol lipase alpha-likeJBrowse
75435at6073Complete325.8216.0amic_s0005.g151.t1HAUS augmin-like complex subunit 2JBrowse
75436at6073Complete1015.6589.0amic_s0078.g39.t1solute carrier family 12 member 8JBrowse
75439at6073Fragmented422.9245.0amic_s0103.g28.t1tRNA (guanine(37)-N1)-methyltransferaseJBrowse
75443at6073Complete399.6254.0amic_s0102.g97.t1RNA-binding protein with multiple splicing-likeJBrowse
75444at6073Complete1134.5570.0amic_s0198.g2.t1IQ and ubiquitin-like domain-containingJBrowse
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