BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75569at6073Complete511.7289.0FUN_006657-T1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Complete755.8441.0FUN_035663-T1protein CBFA2T3-likeJBrowse
75587at6073Complete646.2378.0FUN_007893-T1nuclease EXOG, mitochondrialJBrowse
75598at6073Complete810.0481.0FUN_025725-T1transcription factor CP2JBrowse
75599at6073Complete1066.9628.0FUN_001455-T1rho-related BTB domain-containing protein 1JBrowse
75603at6073Duplicated560.9328.0FUN_023260-T1LIM domain-binding protein 2JBrowse
75603at6073Duplicated540.4300.0FUN_023260-T3LIM domain-binding protein 2JBrowse
75608at6073Complete745.3452.0FUN_008577-T1rabenosyn-5JBrowse
75610at6073Complete311.2200.0FUN_029307-T1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Complete1139.5631.0FUN_000263-T1dymeclin-likeJBrowse
75616at6073Fragmented454.1255.0FUN_037477-T1FAS-associated factor 2JBrowse
75617at6073Duplicated1151.7636.0FUN_012052-T1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1JBrowse
75617at6073Duplicated1142.1624.0FUN_012052-T2SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1JBrowse
75618at6073Complete663.7387.0FUN_022602-T1zinc finger protein 622JBrowse
75625at6073Complete380.1213.0FUN_038003-T1Methyltransferase-like protein 23JBrowse
75628at6073Complete506.7272.0FUN_012774-T15'-AMP-activated protein kinase subunit beta-2-likeJBrowse
75634at6073Complete552.5326.0FUN_004378-T1Coiled-coil domain-containing protein 130JBrowse
75635at6073Complete591.8410.0FUN_023631-T1transcription factor SOX-4JBrowse
75642at6073Complete843.5517.0FUN_037849-T1uncharacterized protein LOC116287646JBrowse
75645at6073Complete867.1512.0FUN_028287-T1Histone H4 transcription factorJBrowse
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