BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77005at6073Complete466.2327.0pspe_0.1.m1.20210.m1thioredoxin domain-containing protein 5JBrowse
77006at6073Complete435.4242.0pspe_0.1.m1.11660.m1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete306.6235.0pspe_0.1.m1.29442.m1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1325.9806.0pspe_0.1.m1.41838.m1radial spoke head 10 homolog B-likeJBrowse
77034at6073Complete1957.11719.0pspe_0.1.m1.51599.m1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77036at6073Complete474.1292.0pspe_0.1.m1.32852.m1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Complete1843.71206.0pspe_0.1.m1.22345.m1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete402.9269.0pspe_0.1.m1.44028.m1E3 ubiquitin-protein ligase rnf146JBrowse
77067at6073Complete573.4430.0pspe_0.1.m1.59442.m1protein Spindly-likeJBrowse
77068at6073Complete1863.11218.0pspe_0.1.m1.49164.m1kinesin-like protein 1 isoform X1JBrowse
77076at6073Complete1447.0959.0pspe_0.1.m1.35753.m1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Complete754.6431.0pspe_0.1.m1.13450.m1coiled-coil domain-containing protein 96JBrowse
77082at6073Duplicated421.5275.0pspe_0.1.m1.45148.m1uncharacterized protein LOC116292340JBrowse
77082at6073Duplicated421.5275.0pspe_0.1.m1.70634.m1uncharacterized protein LOC116292340JBrowse
77088at6073Complete1225.8786.0pspe_0.1.m1.19790.m12 -5 -oligoadenylate synthase 1JBrowse
77092at6073Complete621.8424.0pspe_0.1.m1.69567.m1nucleotide exchange factor SIL1JBrowse
77093at6073Fragmented153.485.0pspe_0.1.m1.14736.m1tetratricopeptide repeat protein 33JBrowse
77095at6073Fragmented360.5194.0pspe_0.1.m1.20632.m1DNA cross-link repair 1AJBrowse
77101at6073Complete1039.3663.0pspe_0.1.m1.22933.m1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Complete941.5708.0pspe_0.1.m1.51385.m1ribonucleases P/MRP protein subunit POP1-likeJBrowse
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