BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75369at6073Complete502.4286.0acyt_s0253.g28.t1mesoderm-specific transcript protein-likeJBrowse
75378at6073Duplicated441.2297.0acyt_s0148.g56.t1transmembrane protein 198JBrowse
75378at6073Duplicated414.7280.0acyt_s0148.g56.t2transmembrane protein 198JBrowse
75382at6073Duplicated794.7432.0acyt_s0184.g18.t1potassium voltage-gated channel subfamily A member 7JBrowse
75382at6073Duplicated703.6377.0acyt_s3080.g1.t1potassium voltage-gated channel subfamily A member 7JBrowse
75387at6073Complete1234.4753.0acyt_s0057.g88.t1SID1 transmembrane family member 1JBrowse
75389at6073Duplicated152.578.0acyt_s0169.g12.t1NADH dehydrogenase JBrowse
75389at6073Duplicated145.473.0acyt_s0169.g12.t2NADH dehydrogenase JBrowse
75392at6073Complete884.5484.0acyt_s0075.g8.t1RNA-binding protein MEX3BJBrowse
75394at6073Fragmented569.3309.0acyt_s0006.g240.t1cell division control protein 6 homologJBrowse
75398at6073Complete457.3219.0acyt_s0002.g146.t1YEATS domain-containing protein 4JBrowse
75407at6073Duplicated957.0527.0acyt_s0308.g19.t2SRSF protein kinase 1JBrowse
75407at6073Duplicated954.2525.0acyt_s0308.g19.t1SRSF protein kinase 1JBrowse
75410at6073Complete665.5422.0acyt_s0232.g4.t1Zinc finger CCHC domain-containing 4JBrowse
75414at6073Complete386.1210.0acyt_s0171.g20.t1charged multivesicular body protein 6JBrowse
75418at6073Fragmented982.5479.0acyt_s0214.g26.t1inactive rhomboid protein 1JBrowse
75421at6073Duplicated1186.5697.0acyt_s0285.g30.t2ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75421at6073Duplicated1186.4697.0acyt_s0285.g30.t1ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75422at6073Complete557.4314.0acyt_s0133.g34.t1transmembrane protein 165JBrowse
75433at6073Complete1089.2637.0acyt_s0011.g195.t1sn1-specific diacylglycerol lipase alpha-likeJBrowse
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