BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75512at6073Complete557.6317.0aint_s0156.g16.t1quinone oxidoreductase-likeJBrowse
75520at6073Complete841.2480.0aint_s0304.g4.t1coiled-coil domain-containing protein 63JBrowse
75525at6073Complete294.8183.0aint_s0015.g36.t1sugar transporter SWEET1-likeJBrowse
75533at6073Complete473.4288.0aint_s0023.g46.t1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Complete1279.3792.0aint_s0144.g4.t1transcriptional repressor NF-X1-likeJBrowse
75542at6073Duplicated4831.33290.0aint_s0143.g15.t1protocadherin-like proteinJBrowse
75542at6073Duplicated4819.33290.0aint_s0143.g15.t2protocadherin-like proteinJBrowse
75557at6073Fragmented925.5441.0aint_s0201.g14.t1grainyhead-like protein 1 homologJBrowse
75561at6073Complete415.3214.0aint_s0095.g31.t1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Complete625.8323.0aint_s0012.g53.t1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Complete1327.4723.0aint_s0012.g48.t1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Fragmented1404.4821.0aint_s0228.g48.t1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Complete512.3289.0aint_s0080.g48.t1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Duplicated756.0441.0aint_s0020.g23.t2protein CBFA2T3-likeJBrowse
75574at6073Duplicated755.8441.0aint_s0020.g23.t1protein CBFA2T3-likeJBrowse
75587at6073Complete648.0378.0aint_s0009.g45.t1nuclease EXOG, mitochondrialJBrowse
75598at6073Duplicated811.8481.0aint_s0096.g55.t2transcription factor CP2JBrowse
75598at6073Duplicated752.3427.0aint_s0096.g55.t1transcription factor CP2JBrowse
75599at6073Complete1067.5628.0aint_s0266.g29.t1rho-related BTB domain-containing protein 1JBrowse
75603at6073Duplicated557.0328.0aint_s0017.g66.t5LIM domain-binding protein 2JBrowse
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