BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75651at6073Complete1791.01064.0FUN_028099-T2Hypoxia up-regulated protein 1JBrowse
75659at6073Complete653.3390.0FUN_008107-T1RNA-binding protein Nova-1JBrowse
75660at6073Fragmented513.6296.0FUN_029275-T1importin subunit alpha-9-likeJBrowse
75664at6073Complete510.1332.0FUN_006943-T1SynaptotagminJBrowse
75665at6073Complete307.3162.0FUN_015066-T1transmembrane protein 17BJBrowse
75667at6073Complete994.0591.0FUN_004896-T1Tyrosine-protein phosphatase non-receptor type 9JBrowse
75670at6073Duplicated994.3550.0FUN_043510-T1cilia- and flagella-associated protein 157JBrowse
75670at6073Duplicated935.6512.0FUN_043510-T2cilia- and flagella-associated protein 157JBrowse
75671at6073Complete1634.1887.0FUN_039883-T1ER degradation-enhancing alpha-mannosidase-like protein 3JBrowse
75678at6073Complete247.2161.0FUN_042844-T1dynactin subunit 3JBrowse
75680at6073Complete759.6407.0FUN_012758-T1serine/threonine-protein kinase 40JBrowse
75681at6073Complete1626.61014.0FUN_041788-T1fibronectin type-III domain-containing 3A-likeJBrowse
75682at6073Complete426.7217.0FUN_042001-T1spliceosome-associated CWC15 homologJBrowse
75701at6073Complete1644.2995.0FUN_036195-T1Ankyrin repeat domain-containing protein 27JBrowse
75703at6073Complete2199.51458.0FUN_015445-T1GATOR complex protein DEPDC5JBrowse
75710at6073Complete983.7616.0FUN_043581-T1Mini-chromosome maintenance complex-bindingJBrowse
75713at6073Complete1714.31150.0FUN_033763-T1UHRF1-binding protein 1-likeJBrowse
75717at6073Complete291.6162.0FUN_035266-T1ADP-ribosylation factor-like protein 2-binding proteinJBrowse
75721at6073Duplicated1025.4739.0FUN_016709-T1lutropin-choriogonadotropic hormone receptor-likeJBrowse
75721at6073Duplicated934.7673.0FUN_016709-T2lutropin-choriogonadotropic hormone receptor-likeJBrowse
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