BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77114at6073Complete1328.6939.0pspe_0.1.m1.24206.m1folliculin-interacting protein 1JBrowse
77115at6073Fragmented352.5207.0pspe_0.1.m1.8051.m1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Complete176.4114.0pspe_0.1.m1.14463.m1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete615.3414.0pspe_0.1.m1.63014.m1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Complete662.9541.0pspe_0.1.m1.14224.m1kinetochore protein NDC80 homologJBrowse
77163at6073Complete677.0448.0pspe_0.1.m1.28915.m1coiled-coil domain-containing protein 138JBrowse
77166at6073Fragmented366.9183.0pspe_0.1.m1.5271.m1forkhead box protein J3-likeJBrowse
77172at6073Fragmented136.698.0pspe_0.1.m1.35051.m1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Fragmented387.2250.0pspe_0.1.m1.17817.m1HAUS augmin-like complex subunit 4JBrowse
77182at6073Complete353.8265.0pspe_0.1.m1.21738.m1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete915.8567.0pspe_0.1.m1.52668.m1transcriptional protein SWT1-likeJBrowse
77192at6073Fragmented223.1150.0pspe_0.1.m1.30308.m1HAUS augmin-like complex subunit 1JBrowse
77199at6073Complete391.6237.0pspe_0.1.m1.53601.m1reticulon-1-AJBrowse
77200at6073Complete587.2515.0pspe_0.1.m1.42855.m1scaffold protein salvador-likeJBrowse
77208at6073Fragmented315.798.0pspe_0.1.m1.50775.m1ribonuclease IIIJBrowse
77220at6073Complete417.5272.0pspe_0.1.m1.22940.m1uncharacterized protein LOC114517244JBrowse
77225at6073Fragmented2588.71730.0pspe_0.1.m1.15931.m1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete772.3443.0pspe_0.1.m1.9350.m1ETS translocation variant 1JBrowse
77228at6073Fragmented365.4229.0pspe_0.1.m1.57667.m1transcription factor AP-1-likeJBrowse
77240at6073Complete1030.4781.0pspe_0.1.m1.25139.m1protein PAT1 homolog 1JBrowse
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