BUSCO Gene Details in Acropora hemprichii

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora hemprichiiBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 75.3% [S: 72.1%, D: 3.3%] F: 15.5%, M: 9.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,413 (75.3%)2,308 (72.1%)105 (3.3%)495 (15.5%)295 (9.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora hemprichii: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77163at6073Complete673.1448.0Ahemp_017114-T1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete567.3410.0Ahemp_006548-T1forkhead box protein J3-likeJBrowse
77171at6073Complete402.2287.0Ahemp_018951-T1transcriptional regulator Myc-1-likeJBrowse
77172at6073Fragmented245.8169.0Ahemp_010421-T1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Fragmented350.7235.0Ahemp_025240-T1HAUS augmin-like complex subunit 4JBrowse
77182at6073Fragmented199.6185.0Ahemp_009566-T1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete928.9569.0Ahemp_014464-T1transcriptional protein SWT1-likeJBrowse
77192at6073Complete328.0227.0Ahemp_014872-T1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete380.1317.0Ahemp_014416-T1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Complete394.4235.0Ahemp_003279-T1reticulon-1-AJBrowse
77200at6073Fragmented404.2395.0Ahemp_015980-T1scaffold protein salvador-likeJBrowse
77208at6073Fragmented525.3309.0Ahemp_018198-T1ribonuclease IIIJBrowse
77217at6073Complete374.0252.0Ahemp_011596-T1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Complete402.9271.0Ahemp_002054-T1uncharacterized protein LOC114517244JBrowse
77225at6073Fragmented2136.21608.0Ahemp_005822-T1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete742.1443.0Ahemp_010949-T1ETS translocation variant 1JBrowse
77228at6073Complete439.3305.0Ahemp_016938-T1transcription factor AP-1-likeJBrowse
77240at6073Complete899.5697.0Ahemp_016524-T1protein PAT1 homolog 1JBrowse
77246at6073Complete464.6361.0Ahemp_008391-T1Stromal membrane-associated protein 1JBrowse
77250at6073Complete1281.0891.0Ahemp_017931-T1rab GTPase-binding effector protein 1JBrowse
Go to page: of 152 pages
TOP