BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75603at6073Duplicated537.2300.0aint_s0017.g66.t2LIM domain-binding protein 2JBrowse
75603at6073Duplicated536.2300.0aint_s0017.g66.t3LIM domain-binding protein 2JBrowse
75603at6073Duplicated531.5300.0aint_s0017.g66.t4LIM domain-binding protein 2JBrowse
75603at6073Duplicated531.2300.0aint_s0017.g66.t1LIM domain-binding protein 2JBrowse
75608at6073Complete746.6452.0aint_s0244.g14.t1rabenosyn-5JBrowse
75610at6073Complete315.0200.0aint_s0167.g20.t1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Complete1138.9631.0aint_s0044.g29.t1dymeclin-likeJBrowse
75616at6073Complete769.0447.0aint_s0074.g32.t1FAS-associated factor 2JBrowse
75618at6073Complete652.5387.0aint_s0581.g7.t1zinc finger protein 622JBrowse
75625at6073Complete381.9213.0aint_s0101.g87.t1Methyltransferase-like protein 23JBrowse
75634at6073Complete555.1297.0aint_s0158.g45.t1Coiled-coil domain-containing protein 130JBrowse
75635at6073Complete590.3412.0aint_s0322.g13.t1transcription factor SOX-4JBrowse
75642at6073Complete847.3517.0aint_s0341.g6.t1uncharacterized protein LOC116287646JBrowse
75645at6073Complete862.1508.0aint_s0296.g6.t1Histone H4 transcription factorJBrowse
75651at6073Fragmented1166.0795.0aint_s0141.g24.t1Hypoxia up-regulated protein 1JBrowse
75659at6073Duplicated648.3387.0aint_s0003.g102.t1RNA-binding protein Nova-1JBrowse
75659at6073Duplicated605.9349.0aint_s0003.g102.t2RNA-binding protein Nova-1JBrowse
75660at6073Fragmented509.9296.0aint_s1359.g3.t1importin subunit alpha-9-likeJBrowse
75664at6073Complete626.6367.0aint_s0457.g7.t1SynaptotagminJBrowse
75667at6073Complete992.9591.0aint_s0031.g69.t1Tyrosine-protein phosphatase non-receptor type 9JBrowse
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