BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75681at6073Complete1629.91013.0alor_g7214.t1fibronectin type-III domain-containing 3A-likeJBrowse
75682at6073Complete426.7217.0alor_g26636.t1spliceosome-associated CWC15 homologJBrowse
75701at6073Duplicated1518.4963.0alor_g3383.t1Ankyrin repeat domain-containing protein 27JBrowse
75701at6073Duplicated1404.8923.0alor_g3383.t2Ankyrin repeat domain-containing protein 27JBrowse
75703at6073Complete2143.01401.0alor_g15630.t1GATOR complex protein DEPDC5JBrowse
75710at6073Complete987.6616.0alor_g30.t1Mini-chromosome maintenance complex-bindingJBrowse
75713at6073Complete1548.71083.0alor_g2020.t1UHRF1-binding protein 1-likeJBrowse
75717at6073Complete304.9172.0alor_g7542.t1ADP-ribosylation factor-like protein 2-binding proteinJBrowse
75721at6073Complete954.1723.0alor_g23269.t1lutropin-choriogonadotropic hormone receptor-likeJBrowse
75723at6073Complete342.0196.0alor_g7809.t1COMM domain-containing protein 10JBrowse
75730at6073Complete1213.6756.0alor_g11258.t1Integrator complex subunit 7JBrowse
75731at6073Complete1235.7781.0alor_g14617.t1tyrosine-protein kinase FerJBrowse
75733at6073Complete322.4181.0alor_g20978.t1protein/nucleic acid deglycase DJ-1-likeJBrowse
75741at6073Complete845.8511.0alor_g8508.t1inositol-trisphosphate 3-kinase AJBrowse
75746at6073Complete555.5354.0alor_g18513.t1NSFL1 cofactor p47-likeJBrowse
75748at6073Complete784.7535.0alor_g26621.t1vacuolar segregation protein PEP7JBrowse
75749at6073Complete417.1269.0alor_g6833.t1stomatin-like protein 1JBrowse
75750at6073Complete1386.7866.0alor_g6958.t1importin-13JBrowse
75765at6073Complete406.5258.0alor_g15761.t1AnamorsinJBrowse
75777at6073Complete1159.8735.0alor_g21352.t1TBC1 domain family member 12JBrowse
Go to page: of 167 pages
TOP