BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75806at6073Fragmented190.8139.0NY_Scal100_v1.20519.1dnaJ homolog subfamily C member 5-likeJBrowse
75814at6073Complete514.5297.0NY_Scal100_v1.13011.1transcriptional repressor protein YY1-likeJBrowse
75815at6073Complete317.2201.0NY_Scal100_v1.23145.126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Duplicated535.9342.0NY_Scal100_v1.52846.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75820at6073Duplicated529.7342.0NY_Scal100_v1.22811.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Complete446.9289.0NY_Scal100_v1.33901.1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
75831at6073Duplicated495.4404.0NY_Scal100_v1.40734.1tumor susceptibility gene 101 protein-likeJBrowse
75831at6073Duplicated518.4359.0NY_Scal100_v1.30529.1tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Complete216.5128.0NY_Scal100_v1.35185.1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Duplicated468.8291.0NY_Scal100_v1.782.1transmembrane protein 19JBrowse
75846at6073Duplicated432.6266.0NY_Scal100_v1.51579.1transmembrane protein 19JBrowse
75852at6073Fragmented362.9276.0NY_Scal100_v1.3234.1anaphase-promoting complex subunit 7JBrowse
75861at6073Complete326.8253.0NY_Scal100_v1.1134.1pituitary homeobox 2-likeJBrowse
75862at6073Complete645.4482.0NY_Scal100_v1.50085.1F-box/LRR-repeat protein 5JBrowse
75871at6073Duplicated1272.2821.0NY_Scal100_v1.4586.1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75871at6073Duplicated1251.9821.0NY_Scal100_v1.3131.1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75882at6073Fragmented399.7190.0NY_Scal100_v1.36564.1membralin-like isoform X1JBrowse
75888at6073Fragmented284.2225.0NY_Scal100_v1.12016.1stAR-related lipid transfer protein 7, mitochondrialJBrowse
75900at6073Complete545.1351.0NY_Scal100_v1.20899.1AAR2 homologJBrowse
75908at6073Fragmented449.1354.0NY_Scal100_v1.18195.1uncharacterized protein LOC116298666JBrowse
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