BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75815at6073Complete351.7200.0FUN_027830-T126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Complete566.2338.0FUN_037493-T1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Complete547.1315.0FUN_037415-T1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
75831at6073Fragmented351.8275.0FUN_000568-T1tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Complete219.4129.0FUN_011263-T1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Complete518.4290.0FUN_001154-T1transmembrane protein 19JBrowse
75851at6073Fragmented712.1514.0FUN_000614-T1WD repeat-containing protein 91JBrowse
75852at6073Complete965.7543.0FUN_014682-T1anaphase-promoting complex subunit 7JBrowse
75861at6073Fragmented310.5194.0FUN_006830-T1pituitary homeobox 2-likeJBrowse
75862at6073Complete741.9482.0FUN_003166-T1F-box/LRR-repeat protein 5JBrowse
75871at6073Complete1375.7822.0FUN_010931-T1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75882at6073Complete813.3437.0FUN_030183-T1membralin-like isoform X1JBrowse
75888at6073Duplicated445.0293.0FUN_022804-T1stAR-related lipid transfer protein 7, mitochondrialJBrowse
75888at6073Duplicated416.6277.0FUN_022804-T2stAR-related lipid transfer protein 7, mitochondrialJBrowse
75900at6073Fragmented322.7195.0FUN_008117-T1AAR2 homologJBrowse
75908at6073Complete735.2459.0FUN_023772-T1uncharacterized protein LOC116298666JBrowse
75910at6073Complete229.0141.0FUN_035263-T1Cytochrome c oxidase subunitJBrowse
75912at6073Duplicated651.5334.0FUN_037809-T1E3 ubiquitin-protein ligase RING2-likeJBrowse
75912at6073Duplicated587.5304.0FUN_037809-T2E3 ubiquitin-protein ligase RING2-likeJBrowse
75915at6073Complete759.3441.0FUN_029345-T1phospholipase D3-likeJBrowse
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