BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75777at6073Complete1179.5735.0aint_s0098.g54.t1TBC1 domain family member 12JBrowse
75783at6073Complete1940.71122.0aint_s0030.g21.t1Sister chromatid cohesion protein PDS5 AJBrowse
75790at6073Fragmented673.7332.0aint_s0014.g83.t1traB domain-containing proteinJBrowse
75793at6073Complete689.4408.0aint_s0243.g13.t1headcase proteinJBrowse
75797at6073Complete937.2525.0aint_s0261.g10.t1protein RFT1 homologJBrowse
75798at6073Complete1665.71017.0aint_s0332.g18.t1pleckstrin homology-like domain family B member 1JBrowse
75801at6073Duplicated887.9464.0aint_s0185.g10.t1rho GTPase-activating protein 44JBrowse
75801at6073Duplicated862.1464.0aint_s0185.g10.t2rho GTPase-activating protein 44JBrowse
75806at6073Duplicated395.6209.0aint_s0012.g37.t2dnaJ homolog subfamily C member 5-likeJBrowse
75806at6073Duplicated384.2196.0aint_s0012.g37.t1dnaJ homolog subfamily C member 5-likeJBrowse
75814at6073Complete648.6322.0aint_s0111.g4.t1transcriptional repressor protein YY1-likeJBrowse
75815at6073Complete349.0200.0aint_s0323.g7.t126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Duplicated566.6338.0aint_s0074.g15.t1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75820at6073Duplicated482.6337.0aint_s0074.g14.t1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Complete546.6315.0aint_s0267.g5.t1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
75831at6073Duplicated644.8411.0aint_s0110.g10.t1tumor susceptibility gene 101 protein-likeJBrowse
75831at6073Duplicated623.7411.0aint_s0110.g10.t4tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Complete219.4129.0aint_s0126.g17.t1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Complete513.4290.0aint_s0051.g46.t1transmembrane protein 19JBrowse
75851at6073Complete1091.2685.0aint_s0144.g17.t1WD repeat-containing protein 91JBrowse
Go to page: of 170 pages
TOP