BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75987at6073Complete469.4383.0NY_Scal100_v1.19406.1spartin-likeJBrowse
76002at6073Complete1047.0704.0NY_Scal100_v1.11675.1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1203.2874.0NY_Scal100_v1.31427.1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Fragmented621.2455.0NY_Scal100_v1.9680.1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Fragmented627.1444.0NY_Scal100_v1.26227.1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Complete1201.7744.0NY_Scal100_v1.25539.1Progesterone-induced-blocking factor 1JBrowse
76027at6073Fragmented236.5167.0NY_Scal100_v1.33812.1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Duplicated343.6215.0NY_Scal100_v1.51580.1bcl-2 homologous antagonist killerJBrowse
76028at6073Duplicated343.0215.0NY_Scal100_v1.781.1bcl-2 homologous antagonist killerJBrowse
76032at6073Fragmented214.8163.0NY_Scal100_v1.32342.1AN1-type zinc finger protein 1JBrowse
76033at6073Complete929.3631.0NY_Scal100_v1.29881.1CyclinJBrowse
76034at6073Complete191.1158.0NY_Scal100_v1.1545.1protein LSM12 homologJBrowse
76038at6073Duplicated353.5216.0NY_Scal100_v1.42093.1SNAREJBrowse
76038at6073Duplicated352.2216.0NY_Scal100_v1.15375.1SNAREJBrowse
76040at6073Fragmented1057.5718.0NY_Scal100_v1.49357.1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Fragmented406.6231.0NY_Scal100_v1.49431.1protein O-mannose kinase-likeJBrowse
76049at6073Fragmented294.5242.0NY_Scal100_v1.35014.1integral membrane protein GPR137B-likeJBrowse
76060at6073Complete288.4164.0NY_Scal100_v1.47790.1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Complete476.0392.0NY_Scal100_v1.15528.1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Fragmented234.1151.0NY_Scal100_v1.31841.1transmembrane protein 199JBrowse
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