BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6500at6073Duplicated651.8401.0aint_s0089.g63.t2uncharacterized protein LOC110045530 isoform X1JBrowse
6500at6073Duplicated619.7391.0aint_s0089.g63.t3uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete1314.4786.0aint_s0332.g13.t1anion exchange protein 2-likeJBrowse
6528at6073Complete445.6230.0aint_s0014.g86.t1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6591at6073Complete571.0309.0aint_s0250.g22.t1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Duplicated1418.9783.0aint_s0101.g73.t3cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6600at6073Duplicated1271.8783.0aint_s0101.g73.t1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6600at6073Duplicated1269.9783.0aint_s0101.g73.t2cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Duplicated515.6257.0aint_s0016.g71.t1probable tRNA(His) guanylyltransferaseJBrowse
6672at6073Duplicated468.4222.0aint_s0016.g71.t4probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1685.8775.0aint_s0042.g20.t1AconitaseJBrowse
6686at6073Complete297.0256.0aint_s0135.g44.t1transmembrane protein 248JBrowse
6716at6073Complete175.299.0aint_s0227.g32.t1Small integral membrane protein 14JBrowse
6727at6073Complete405.9220.0aint_s0029.g32.t1Radial spoke head 1JBrowse
6767at6073Complete175.599.0aint_s0113.g22.t110 kda heat shock proteinJBrowse
6836at6073Complete892.4506.0aint_s0280.g37.t1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete657.8432.0aint_s0059.g38.t1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Complete375.3249.0aint_s0307.g24.t1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Duplicated727.8418.0aint_s0085.g35.t1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6947at6073Duplicated655.7358.0aint_s0085.g35.t2tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
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