BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6314at6073Complete895.5591.0alor_g11143.t1SET and MYND domain-containing protein 4JBrowse
6330at6073Complete980.7481.0alor_g9191.t1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete713.7358.0alor_g8977.t1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6371at6073Complete432.1200.0alor_g24365.t1NADH-ubiquinone oxidoreductase subunit 8JBrowse
6375at6073Complete702.5390.0alor_g13581.t1putative cytochrome P450 120JBrowse
6403at6073Complete276.5151.0alor_g24476.t1bis(5'-adenosyl)-triphosphataseJBrowse
6410at6073Complete1257.0666.0alor_g12698.t1ubiquitin-protein ligase E3AJBrowse
6431at6073Complete445.8268.0alor_g3300.t1probable transcriptional regulatory protein Kole_1935JBrowse
6483at6073Complete2162.8965.0alor_g3948.t1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Complete620.4388.0alor_g2229.t1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete1418.8814.0alor_g14214.t1anion exchange protein 2-likeJBrowse
6528at6073Complete452.4236.0alor_g1637.t1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6530at6073Complete355.6233.0alor_g23552.t1sex-determining region Y proteinJBrowse
6591at6073Complete571.2308.0alor_g5959.t1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Fragmented780.3523.0alor_g10075.t1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Complete517.4257.0alor_g14144.t1probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1683.7775.0alor_g21681.t1AconitaseJBrowse
6686at6073Complete286.9256.0alor_g24500.t1transmembrane protein 248JBrowse
6716at6073Complete176.199.0alor_g9536.t1Small integral membrane protein 14JBrowse
6727at6073Complete406.0220.0alor_g3622.t1Radial spoke head 1JBrowse
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